| 1 | |  Carlisle United | 46 | 25 | 11 | 10 | 84 | 42 | 42 | 86 | B17:00 | 15/04/06 | R 42  Bristol Rovers 1 Carlisle United 1 G17:00 | 17/04/06 | R 43 Carlisle United 2 Notts County 1 B17:00 | 22/04/06 | R 44 Mansfield Town 1 Carlisle United 1 M17:00 | 29/04/06 | R 45 Carlisle United 1 Torquay United 2 G21:45 | 02/05/06 | R 40 Rochdale 0 Carlisle United 2 B17:00 | 06/05/06 | R 46 Stockport County FC 0 Carlisle United 0 |
| 2 | |  Northampton Town | 46 | 22 | 17 | 7 | 63 | 37 | 26 | 83 | B15:00 | 08/04/06 | R 41 Northampton Town 2 Rochdale 2 G17:00 | 15/04/06 | R 42 Darlington 0 Northampton Town 1 G17:00 | 17/04/06 | R 43 Northampton Town 2 Stockport County FC 0 G17:00 | 22/04/06 | R 44 Oxford United 1 Northampton Town 3 G17:00 | 29/04/06 | R 45 Northampton Town 1 Chester FC 0 B17:00 | 06/05/06 | R 46 Grimsby Town 1 Northampton Town 1 |
| 3 | |  Leyton Orient London | 46 | 22 | 15 | 9 | 67 | 51 | 16 | 81 | G17:00 | 08/04/06 | R 41 Leyton Orient London 2 Boston United FC 0 G17:00 | 15/04/06 | R 42 Mansfield Town 0 Leyton Orient London 1 B17:00 | 17/04/06 | R 43 Leyton Orient London 0 Grimsby Town 0 B17:00 | 22/04/06 | R 44 Lincoln City 1 Leyton Orient London 1 G17:00 | 29/04/06 | R 45 Leyton Orient London 2 Peterborough United 1 G17:00 | 06/05/06 | R 46 Oxford United 2 Leyton Orient London 3 |
| 4 | |  Grimsby Town | 46 | 22 | 12 | 12 | 64 | 44 | 20 | 78 | G21:45 | 21/04/06 | R 44 Grimsby Town 1 Cheltenham Town 0 B17:00 | 29/04/06 | R 45 Macclesfield Town 1 Grimsby Town 1 B17:00 | 06/05/06 | R 46 Grimsby Town 1 Northampton Town 1 G14:05 | 13/05/06 | R semifinal Lincoln City 0 Grimsby Town 1 G21:45 | 16/05/06 | R semifinal Grimsby Town 2 Lincoln City 1 M17:00 | 28/05/06 | R final Cheltenham Town 1 Grimsby Town 0 |
| 5 | |  Cheltenham Town | 46 | 19 | 15 | 12 | 65 | 53 | 12 | 72 | M21:45 | 21/04/06 | R 44 Grimsby Town 1 Cheltenham Town 0 G17:00 | 29/04/06 | R 45 Cheltenham Town 2 Notts County 0 G17:00 | 06/05/06 | R 46 Mansfield Town 0 Cheltenham Town 5 G20:05 | 13/05/06 | R semifinal Wycombe Wanderers 1 Cheltenham Town 2 B21:45 | 18/05/06 | R semifinal Cheltenham Town 0 Wycombe Wanderers 0 G17:00 | 28/05/06 | R final Cheltenham Town 1 Grimsby Town 0 |
| 6 | |  Wycombe Wanderers | 46 | 18 | 17 | 11 | 72 | 56 | 16 | 71 | M17:00 | 17/04/06 | R 43 Wycombe Wanderers 0 Lincoln City 3 G17:00 | 22/04/06 | R 44 AFC Rushden And Diamonds 1 Wycombe Wanderers 3 M17:00 | 29/04/06 | R 45 Wycombe Wanderers 0 Darlington 1 G17:00 | 06/05/06 | R 46 Peterborough United 0 Wycombe Wanderers 2 M20:05 | 13/05/06 | R semifinal Wycombe Wanderers 1 Cheltenham Town 2 B21:45 | 18/05/06 | R semifinal Cheltenham Town 0 Wycombe Wanderers 0 |
| 7 | |  Lincoln City | 46 | 15 | 21 | 10 | 65 | 53 | 12 | 66 | G17:00 | 17/04/06 | R 43 Wycombe Wanderers 0 Lincoln City 3 B17:00 | 22/04/06 | R 44 Lincoln City 1 Leyton Orient London 1 G17:00 | 29/04/06 | R 45 Shrewsbury Town 0 Lincoln City 1 B17:00 | 06/05/06 | R 46 Lincoln City 1 Rochdale 1 M14:05 | 13/05/06 | R semifinal Lincoln City 0 Grimsby Town 1 M21:45 | 16/05/06 | R semifinal Grimsby Town 2 Lincoln City 1 |
| 8 | |  Darlington | 46 | 16 | 15 | 15 | 58 | 52 | 6 | 63 | G17:00 | 08/04/06 | R 41 Torquay United 1 Darlington 2 M17:00 | 15/04/06 | R 42 Darlington 0 Northampton Town 1 B17:00 | 17/04/06 | R 43 Cheltenham Town 1 Darlington 1 M17:00 | 22/04/06 | R 44 Darlington 2 Bury 3 G17:00 | 29/04/06 | R 45 Wycombe Wanderers 0 Darlington 1 B17:00 | 06/05/06 | R 46 Darlington 1 Wrexham 1 |
| 9 | |  Peterborough United | 46 | 17 | 11 | 18 | 57 | 49 | 8 | 62 | G17:00 | 08/04/06 | R 41 Bury 1 Peterborough United 3 M17:00 | 15/04/06 | R 42 Peterborough United 0 Boston United FC 1 M17:00 | 17/04/06 | R 43 Rochdale 1 Peterborough United 0 G17:00 | 22/04/06 | R 44 Peterborough United 3 Macclesfield Town 2 M17:00 | 29/04/06 | R 45 Leyton Orient London 2 Peterborough United 1 M17:00 | 06/05/06 | R 46 Peterborough United 0 Wycombe Wanderers 2 |
| 10 | |  Shrewsbury Town | 46 | 16 | 13 | 17 | 55 | 55 | 0 | 61 | G14:00 | 09/04/06 | R 41 Wrexham 1 Shrewsbury Town 2 B17:00 | 15/04/06 | R 42 Grimsby Town 1 Shrewsbury Town 1 G21:45 | 18/04/06 | R 43 Shrewsbury Town 4 AFC Rushden And Diamonds 1 M17:00 | 22/04/06 | R 44 Stockport County FC 3 Shrewsbury Town 1 M17:00 | 29/04/06 | R 45 Shrewsbury Town 0 Lincoln City 1 G17:00 | 06/05/06 | R 46 Chester FC 0 Shrewsbury Town 1 |
| 11 | |  Boston United FC | 46 | 15 | 16 | 15 | 50 | 60 | -10 | 61 | M17:00 | 08/04/06 | R 41 Leyton Orient London 2 Boston United FC 0 G17:00 | 15/04/06 | R 42 Peterborough United 0 Boston United FC 1 G17:00 | 17/04/06 | R 43 Boston United FC 1 Oxford United 0 M17:00 | 22/04/06 | R 44 Bristol Rovers 3 Boston United FC 1 G17:00 | 29/04/06 | R 45 Boston United FC 2 AFC Rushden And Diamonds 0 B17:00 | 06/05/06 | R 46 Torquay United 0 Boston United FC 0 |
| 12 | |  Bristol Rovers | 46 | 17 | 9 | 20 | 59 | 67 | -8 | 60 | M17:00 | 08/04/06 | R 41 Bristol Rovers 0 AFC Rushden And Diamonds 1 B17:00 | 15/04/06 | R 42 Bristol Rovers 1 Carlisle United 1 M17:00 | 17/04/06 | R 43 Wrexham 1 Bristol Rovers 0 G17:00 | 22/04/06 | R 44 Bristol Rovers 3 Boston United FC 1 M17:00 | 29/04/06 | R 45 Rochdale 2 Bristol Rovers 0 M17:00 | 06/05/06 | R 46 Bristol Rovers 2 Macclesfield Town 3 |
| 13 | |  Wrexham | 46 | 15 | 14 | 17 | 61 | 54 | 7 | 59 | M21:30 | 12/04/06 | R 24 Chester FC 2 Wrexham 1 M17:00 | 15/04/06 | R 42 Stockport County FC 2 Wrexham 1 G17:00 | 17/04/06 | R 43 Wrexham 1 Bristol Rovers 0 M17:00 | 22/04/06 | R 44 Torquay United 1 Wrexham 0 B17:00 | 29/04/06 | R 45 Wrexham 1 Oxford United 1 B17:00 | 06/05/06 | R 46 Darlington 1 Wrexham 1 |
| 14 | |  Rochdale | 46 | 14 | 14 | 18 | 66 | 69 | -3 | 56 | G17:00 | 17/04/06 | R 43 Rochdale 1 Peterborough United 0 B17:00 | 22/04/06 | R 44 Notts County 1 Rochdale 1 B21:45 | 25/04/06 | R 32 Rochdale 1 Barnet FC 1 G17:00 | 29/04/06 | R 45 Rochdale 2 Bristol Rovers 0 M21:45 | 02/05/06 | R 40 Rochdale 0 Carlisle United 2 B17:00 | 06/05/06 | R 46 Lincoln City 1 Rochdale 1 |
| 15 | |  Chester FC | 46 | 14 | 12 | 20 | 53 | 59 | -6 | 54 | G21:30 | 12/04/06 | R 24 Chester FC 2 Wrexham 1 G17:00 | 15/04/06 | R 42 Chester FC 1 Wycombe Wanderers 0 B17:00 | 17/04/06 | R 43 Bury 0 Chester FC 0 B17:00 | 22/04/06 | R 44 Chester FC 0 Barnet FC 0 M17:00 | 29/04/06 | R 45 Northampton Town 1 Chester FC 0 M17:00 | 06/05/06 | R 46 Chester FC 0 Shrewsbury Town 1 |
| 16 | |  Mansfield Town | 46 | 13 | 15 | 18 | 59 | 66 | -7 | 54 | B17:00 | 08/04/06 | R 41 Lincoln City 1 Mansfield Town 1 M17:00 | 15/04/06 | R 42 Mansfield Town 0 Leyton Orient London 1 M17:00 | 17/04/06 | R 43 Barnet FC 1 Mansfield Town 0 B17:00 | 22/04/06 | R 44 Mansfield Town 1 Carlisle United 1 B17:00 | 29/04/06 | R 45 Bury 0 Mansfield Town 0 M17:00 | 06/05/06 | R 46 Mansfield Town 0 Cheltenham Town 5 |
| 17 | |  Macclesfield Town | 46 | 12 | 18 | 16 | 60 | 71 | -11 | 54 | G17:00 | 08/04/06 | R 41 Macclesfield Town 2 Wycombe Wanderers 1 B17:00 | 15/04/06 | R 42 Notts County 1 Macclesfield Town 1 M17:00 | 17/04/06 | R 43 Macclesfield Town 0 Torquay United 2 M17:00 | 22/04/06 | R 44 Peterborough United 3 Macclesfield Town 2 B17:00 | 29/04/06 | R 45 Macclesfield Town 1 Grimsby Town 1 G17:00 | 06/05/06 | R 46 Bristol Rovers 2 Macclesfield Town 3 |
| 18 | |  Barnet FC | 46 | 12 | 18 | 16 | 44 | 57 | -13 | 54 | M17:00 | 15/04/06 | R 42 Oxford United 2 Barnet FC 0 G17:00 | 17/04/06 | R 43 Barnet FC 1 Mansfield Town 0 B17:00 | 22/04/06 | R 44 Chester FC 0 Barnet FC 0 B21:45 | 25/04/06 | R 32 Rochdale 1 Barnet FC 1 B17:00 | 29/04/06 | R 45 Barnet FC 0 Stockport County FC 0 G17:00 | 06/05/06 | R 46 AFC Rushden And Diamonds 1 Barnet FC 2 |
| 19 | |  Bury | 46 | 12 | 17 | 17 | 45 | 57 | -12 | 53 | M17:00 | 08/04/06 | R 41 Bury 1 Peterborough United 3 B17:00 | 15/04/06 | R 42 Lincoln City 1 Bury 1 B17:00 | 17/04/06 | R 43 Bury 0 Chester FC 0 G17:00 | 22/04/06 | R 44 Darlington 2 Bury 3 B17:00 | 29/04/06 | R 45 Bury 0 Mansfield Town 0 B17:00 | 06/05/06 | R 46 Notts County 2 Bury 2 |
| 20 | |  Torquay United | 46 | 13 | 13 | 20 | 53 | 66 | -13 | 52 | M17:00 | 15/04/06 | R 42 Torquay United 1 Cheltenham Town 2 G17:00 | 17/04/06 | R 43 Macclesfield Town 0 Torquay United 2 G17:00 | 22/04/06 | R 44 Torquay United 1 Wrexham 0 G21:45 | 25/04/06 | R 39 Torquay United 4 Stockport County FC 0 G17:00 | 29/04/06 | R 45 Carlisle United 1 Torquay United 2 B17:00 | 06/05/06 | R 46 Torquay United 0 Boston United FC 0 |
| 21 | |  Notts County | 46 | 12 | 16 | 18 | 48 | 63 | -15 | 52 | M17:00 | 08/04/06 | R 41 Barnet FC 2 Notts County 1 B17:00 | 15/04/06 | R 42 Notts County 1 Macclesfield Town 1 M17:00 | 17/04/06 | R 43 Carlisle United 2 Notts County 1 B17:00 | 22/04/06 | R 44 Notts County 1 Rochdale 1 M17:00 | 29/04/06 | R 45 Cheltenham Town 2 Notts County 0 B17:00 | 06/05/06 | R 46 Notts County 2 Bury 2 |
| 22 | |  Stockport County FC | 46 | 11 | 19 | 16 | 57 | 78 | -21 | 52 | G17:00 | 15/04/06 | R 42 Stockport County FC 2 Wrexham 1 M17:00 | 17/04/06 | R 43 Northampton Town 2 Stockport County FC 0 G17:00 | 22/04/06 | R 44 Stockport County FC 3 Shrewsbury Town 1 M21:45 | 25/04/06 | R 39 Torquay United 4 Stockport County FC 0 B17:00 | 29/04/06 | R 45 Barnet FC 0 Stockport County FC 0 B17:00 | 06/05/06 | R 46 Stockport County FC 0 Carlisle United 0 |
| 23 | |  Oxford United | 46 | 11 | 16 | 19 | 43 | 57 | -14 | 49 | M17:00 | 08/04/06 | R 41 Oxford United 0 Chester FC 1 G17:00 | 15/04/06 | R 42 Oxford United 2 Barnet FC 0 M17:00 | 17/04/06 | R 43 Boston United FC 1 Oxford United 0 M17:00 | 22/04/06 | R 44 Oxford United 1 Northampton Town 3 B17:00 | 29/04/06 | R 45 Wrexham 1 Oxford United 1 M17:00 | 06/05/06 | R 46 Oxford United 2 Leyton Orient London 3 |
| 24 | |  AFC Rushden And Diamonds | 46 | 11 | 12 | 23 | 44 | 76 | -32 | 45 | G17:00 | 08/04/06 | R 41 Bristol Rovers 0 AFC Rushden And Diamonds 1 B17:00 | 15/04/06 | R 42 AFC Rushden And Diamonds 1 Rochdale 1 M21:45 | 18/04/06 | R 43 Shrewsbury Town 4 AFC Rushden And Diamonds 1 M17:00 | 22/04/06 | R 44 AFC Rushden And Diamonds 1 Wycombe Wanderers 3 M17:00 | 29/04/06 | R 45 Boston United FC 2 AFC Rushden And Diamonds 0 M17:00 | 06/05/06 | R 46 AFC Rushden And Diamonds 1 Barnet FC 2 |
